############# Dataset About ############# Describing what the dataset is about (i.e what was the scope, objective, materials) and providing information about the type of data associated with the given dataset: * Document the nature of information available in a dataset through the Biocaddie **'data type'** object. .. image:: ./_static/DATS-v2.1-alpha-Distribution-Relation-and-Qualifiers.png :alt: A conceptual map detailing Biocaddie DATS data-type qualifiers and data distribution descriptors . In this context, the *‘data type’* required to annotate a DataSet should be viewed as a *content type* [terminology needs to be specified]). This encompasses the nature of the signal recorded in a dataset or information content of interest. For instance: gene expression data or phenotypic data, electronic health records But mime-type may be used. * chemical * sequence * spectrum * audio * image * video * ... but other descriptors may be used such as Biosharing, Scicrunch or re3data category/data domain descriptors. * Data aggregation type: In the context of DataMed indexing, the information obtained from repositories may correspond to datasets served individually or may correspond to collections or records. As these 2 situations represent a very different metadata context, the Biocaddie DATS model allows to distinguish between the two cases. * collection (as in 'collection of instances') * singleton (as in ‘individual instance’) * Data refinement type: To describe the level of data processing associated with the data available from the dataset and its distributions....[terminology needs to be specified]) * raw data * preprocessed data * analyzed data * summarized data * curated data * reannotated data * ... * data privacy protection type: (applicable only to human/clinical data) * fully identifiable none * pseudo-anonymized data * fully anonymized data * not information available * ... * Document the Material, object, scope and Biological Entities the dataset is about and their characteristics or properties. * Document the nature of intervention and Treatment applied to the Material, if any or if applicable. * Data Types and specific Platform Currently, in DataMed, datasets can be search according to Data Type (.e.g Proteomics data) and/or by Platform (e.g. Illumina) DATS provides a mechanism via DataType object to qualify the nature of the data collected in a Dataset. The 4 facets/attributes allow to incrementally specify the type of information contained by the data and how it has been produced * data acquisition / method type: This attribute allows to indicate the technique or technology , also known sometimes as data modality used to acquire the signal. For instance: * ‘crystallography’, * ‘mass spectrometry’ * ‘nucleic acid sequencing’, * ‘computational simulation’ * ‘questionaire based survey’ * 'nuclear magnetic resonance spectroscropy' * 'nuclear magnetic resonance imaging' * 'questionnaire' * ... * platform/instrument type * Agilent, Bruker,Affymetrix,Illumina,SeaHorse * HumanHap550v3.0 * HumanExome-12 v1.1 BeadChip * Sentrix Human-6 Expression BeadChip * SureSelect Human All Exon v2 - 44Mb * HiSeq 2000 * ...